Managing digital libraries

Michael Rowe — Tue, 12 May 2009 18:44:00 +0000

I just re-installed Mendeley after moving from Fedora to Kubuntu and in the process came across a few other posts / sites discussing the problem of managing large numbers of research articles. Here’s a few of the more interesting ones I came across.

Defrosting the digital library: bibliographic tools for the next generation web
How to get scientists to adopt web 2.0 technologies
CiteULike – managing and discovering scholarly references
Zotero word processor integration
The OpenOffice Bibliographic project

The more time I spend with Mendeley, the more impressed I am. However, I’m a bit concerned that when importing my library this time, I’m short about 100 articles and have no way of knowing which ones didn’t make it.

Looking forward to trying the 0.6.5 release of Mendeley…

Mendeley: research paper / PDF management

Michael Rowe — Mon, 06 Apr 2009 09:53:30 +0000

A little while ago I wrote about Zotero and how I felt it came short of my expectations for a reference manager (my main contention was that it wasn’t very efficient at managing my offline content, for example, PDFs. Incidentally, see this interview, which also mentions this shortcoming of Zotero). Today I came across Mendeley, which at first glance seems to fulfil all of my PDF management requirements. It’s still a beta release, so expect some bugs and stability issues.

First of all, Mendeley is both a desktop tool that’s cross-platform (major bonus points already) and web service, running locally and syncing documents and metadata to a remote server. This has the advantage of being both a backup and online library that you can access from any internet-enabled computer. The company provides 500 MB of storage space for members which, while not big enough for everyone, will suffice for most people.

Unlike some services that are jumping on the “social media” bandwagon and are useless, it’s inclusion in Mendeley adds a powerful incentive to use the tool. With an emphasis on collaboration in research, the ability to locate and share information with like-minded people is a great idea. It allows a user to search for other academics / researchers who are participating in similar work and enables the sharing of resources or collaborative work. Users can make their entire library public, or only certain parts of it, and the software will attempt to match similar articles and recommend other members based on extracted metadata and the papers in their libraries. Privacy concerns mean that this will be an opt-in service, rather than enabled by default.

I like the potential of Mendeley’s recent announcement concerning collaboration with CiteULike, which will allow users to integrate data from both services into one place, and share the results with others. The company has also developed a bookmarklet that allows users to automatically import citation information from appropriate sites (e.g. PubMed) straight into your Mendeley library. I also love that Mendeley will monitor folders and automatically add the relevant metadata into your library when you add new resources to a folder. Another interesting feature are the “vanity statistics” (my term for it) that will enable the software to generate individualised stats on your research papers / publications based on who’s reading them. It’s this attention to detail, as well as the social networking tools that set Mendeley apart from other document managers.

All in all, it seems like Mendeley is a great tool for managing PDFs, and the social networking aspect adds an interesting dimension to the process. I’ll still use Zotero in the way that I have been (i.e. for working through and annotating academic content online, usually in blog form), but it seems likely that Mendeley will become the standard tool for managing my PDF library.

/usr/space » citeulike

Managing digital libraries

Mendeley: research paper / PDF management